WebThe link from the BLAST result table has taken us to the Location tab, region in detail view. For more about this view, see the section A region in detail in this course. A red box shows the position of the BLAT/BLAST hit. It matches the 5′ exon of the MTAP gene for numerous coding and non-coding transcripts. WebJan 23, 2014 · They represent local stretches of aligned sequence between the query and the hit sequence (remember, BLAST is a local alignment algorithm). To the best of my knowledge the HSPs for a given hit are sorted in descending order by the BLAST bit score, which means the best (usually the longest) HSP comes first. ...
A Guide to BLAST – CZ ID Help Center
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Perform a BLAST+ reciprocal best hit (RBH) search — …
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